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Monte Carlo ABC AnalysisMonte Carlo ABC Analysis — Object implementing abstract Approximate Bayesian Computation (ABC) |
Functions
void | ncm_abc_free () |
void | ncm_abc_clear () |
gboolean | ncm_abc_data_summary () |
gdouble | ncm_abc_mock_distance () |
gdouble | ncm_abc_distance_prob () |
const gchar * | ncm_abc_get_desc () |
const gchar * | ncm_abc_log_info () |
void | ncm_abc_set_mtype () |
void | ncm_abc_set_data_file () |
void | ncm_abc_set_nthreads () |
void | ncm_abc_set_rng () |
void | ncm_abc_start_run () |
void | ncm_abc_end_run () |
void | ncm_abc_reset () |
void | ncm_abc_set_first_sample_id () |
void | ncm_abc_run () |
void | ncm_abc_run_lre () |
void | ncm_abc_mean_covar () |
#define | NCM_ABC_MIN_FLUSH_INTERVAL |
Properties
NcmDataset * | data-set | Read / Write / Construct Only |
NcmMSet * | mset | Read / Write / Construct Only |
NcmMSetTransKern * | prior | Read / Write / Construct Only |
NcmMSetTransKern * | trans-kernel | Read / Write |
Functions
ncm_abc_data_summary ()
gboolean
ncm_abc_data_summary (NcmABC *abc
);
Calculates the data summary and stores internally.
ncm_abc_mock_distance ()
gdouble ncm_abc_mock_distance (NcmABC *abc
,NcmDataset *dset
,NcmVector *theta
,NcmVector *thetastar
,NcmRNG *rng
);
Calculates the distance of the new point given by thetastar
given the old
point theta
.
ncm_abc_distance_prob ()
gdouble ncm_abc_distance_prob (NcmABC *abc
,gdouble distance
);
Calculates the probability of the distance been accepted.
ncm_abc_get_desc ()
const gchar *
ncm_abc_get_desc (NcmABC *abc
);
Gets the description of the current ABC implementation.
ncm_abc_log_info ()
const gchar *
ncm_abc_log_info (NcmABC *abc
);
Gets the informations about the current run of ABC.
ncm_abc_set_first_sample_id ()
void ncm_abc_set_first_sample_id (NcmABC *abc
,gint first_sample_id
);
FIXME
ncm_abc_run ()
void ncm_abc_run (NcmABC *abc
,guint n
);
Runs the montecarlo until it reaches the n
-th realization. Note that if the
first_id is non-zero it will run n
- first_id realizations.
Property Details
The “trans-kernel”
property
“trans-kernel” NcmMSetTransKern *
Transition Kernel.
Flags: Read / Write